• 21. Hochane, M., van den Berg, P.R.,  Fan, X., Bérenger-Currias, N., Adegeest, E., Bialecka, M., Nieveen, M., Menschaart, M., Chuva de Sousa Lopes, S.M., Semrau, S.
    Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development.
    PLoS Biology 17, e3000152 (2019) pdf
  • 20. Messemaker, T. C., van Leeuwen, S. M., van den Berg, P. R., ‘t Jong, A. E. J., Palstra, R.-J.,  Hoeben, R. C., Semrau, S., Mikkers, H. M. M.
    Allele-specific repression of Sox2 through the long non-coding RNA Sox2ot.
    Scientific Reports  8, 386 (2018) pdf
  • 19. Semrau, S., Goldmann, J.E., Soumillon, M., Mikkelsen, T., Jaenisch, R., van Oudenaarden, A.
    Dynamics of lineage commitment revealed by single-cell transcriptomics of differentiating embryonic stem cells.
    Nature Communications 8, 1096 (2017) pdf
  • 18. Gomes Fernandes, M., Dries, R., Roost, M. S., Semrau, S., de Melo Bernardo, A., Davis, R. P.,Ramakrishnan, R., Szuhai, K., Maas, E., Umans, L., Escalona, V.A., Salvatori, D., Deforce, D., Van Criekinge, W., Huylebroeck, D., Mummery, C., Zwijsen, A., Chuva de Sousa Lopes, S.M.
    BMP-SMAD Signaling Regulates Lineage Priming, but Is Dispensable for Self-Renewal in Mouse Embryonic Stem Cells.
    Stem Cell Reports 6, 1-10 (2016) pdf
  • 17. Semrau, S., van Oudenaarden, A
    Studying  lineage decision-making in vitro: Emerging concepts and novel tools.
    Annu. Rev. Cell Dev. Biol. 31, 317-345 (2015) pdf
  • 16. Slavov, N., Semrau, S., Airoldi, E., Budnik, B., van Oudenaarden, A.
    Differential Stoichiometry among core ribosomal particles.
    Cell Reports 13, 865-873 (2015) pdf
  • 15. Soumillon, M., Cacchiarelli, D., Semrau, S., van Oudenaarden, A., Mikkelsen, T.S.
    Characterization of directed differentiation by high-throughout single-cell RNA-seq
    biorxiv, http://dx.doi.org/10.1101/003236 (2015) pdf
  • 14. Klemm*, S., Semrau*, S., Wiebrands*, K., Mooijman, D., Faddah, D.A., Jaenisch, R. & van Oudenaarden, A. (* equal contribution)
    Transcriptional profiling of cells sorted by RNA abundance.
    Nat Methods 11, 549–551 (2014) pdf
  • 13. Semrau*, S., Crosetto*, N.,  Bienko, M., Boni, M., Bernasconi, M., Chiarle, M. & van Oudenaarden1, A. (* equal contribution)
    FuseFISH: Robust Detection of Transcribed Gene Fusions in Single Cells.
    Cell Reports 6, 18–23 (2014) pdf, supporting website
  • 12. Meckel*, T., Semrau*, S., Schaaf, M. J. M. & Schmidt, T. (* equal contribution)
    Robust assessment of protein complex formation in vivo via single-molecule intensity distributions of autofluorescent proteins.
    Journal of biomedical optics 16, 076016 (2011) pdf
  • 11. Semrau*, S., Holtzer*, L., González-Gaitán, M. & Schmidt, T. (* equal contribution)
    Quantification of Biological Interactions with Particle Image Cross-Correlation Spectroscopy (PICCS).
    Biophys J 100, 1810–1818 (2011) pdf
  • 10. Semrau, S., Pezzarossa, A. & Schmidt, T.
    Microsecond Single-Molecule Tracking (μsSMT).
    Biophys J 100, L19–21 (2011) pdf
  • 9. Semrau, S., Monster, M.W.L., van der Knaap, M., Florea, B.I.,  Schmidt, T. & Overhand, M.
    Membrane lysis by gramicidin S visualized in red blood cells and giant vesicles.
    Biochimica et Biophysica Acta (BBA) – Biomembranes 1798, 2033–2039 (2010) pdf
  • 8. Idema, T., Semrau, S., Storm, C. & Schmidt, T.
    Membrane mediated sorting.
    Phys. Rev. Lett. 104, 198102 (2010) pdf
  • 7. Shaklee*, P. M., Semrau*, S., Malkus, M., Kubick, S., Dogterom, M. & Schmidt, T. (* equal contribution)
    Protein incorporation in giant lipid vesicles under physiological conditions.
    Chembiochem 11, 175–179 (2010) pdf
  • 6. Semrau, S. & Schmidt, T.
    Membrane heterogeneity–from lipid domains to curvature effects.
    Soft Matter 5, 3174–3186 (2009) pdf
  • 5. Semrau*, S., Idema*, T., Schmidt, T. & Storm, C. (* equal contribution)
    Membrane-mediated interactions measured using membrane domains.
    Biophys J 96, 4906–4915 (2009) pdf
  • 4. Semrau, S., Idema, T., Holtzer, L., Schmidt, T. & Storm, C.
    Accurate determination of elastic parameters for multicomponent membranes.
    Phys. Rev. Lett. 100, 088101 (2008) pdf
  • 3. Semrau, S. & Schmidt, T.
    Particle Image Correlation Spectroscopy (PICS): Retrieving Nanometer-Scale Correlations from High-Density Single-Molecule Position Data.
    Biophys J 92, 613–621 (2007) pdf
  • 2. Meckel, T., Gall, L., Semrau, S., Homann, U. & Thiel, G.
    Guard cells elongate: relationship of volume and surface area during stomatal movement.
    Biophys J 92, 1072–1080 (2007) pdf
  • 1. Semrau, S., Schoeller, H. & Wenzel, W.
    Designable electron transport features in one-dimensional arrays of metallic nanoparticles: Monte Carlo study of the relation between shape and transport.
    Phys. Rev. B 72, (2005) pdf